Cluster: Rep_357_CGC14
🧬 Cluster Details
- Gene Count: 21
- CAZyme Count: 13
- Substrate:
- Genome ID: Rep_357
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_357_c_42 | Rep_357_c_42_2 | 657 | 1985 | - | CBM6 | GH43_29 |
| CAZyme | Rep_357_c_42 | Rep_357_c_42_3 | 1989 | 4565 | - | GH115 |
| STP | Rep_357_c_42 | Rep_357_c_42_4 | 4817 | 7969 | + | HATPase_c | HisKA | Y_Y_Y |
| TF | Rep_357_c_42 | Rep_357_c_42_5 | 7966 | 8841 | + | HTH_AraC | HTH_AraC |
| CAZyme | Rep_357_c_42 | Rep_357_c_42_6 | 8838 | 10454 | + | CE20 | CE20 |
| CAZyme | Rep_357_c_42 | Rep_357_c_42_7 | 10607 | 12229 | + | CBM91 | GH43_10 |
| CAZyme | Rep_357_c_42 | Rep_357_c_42_8 | 12463 | 14181 | + | CBM91 | GH43_12 |
| TC | Rep_357_c_42 | Rep_357_c_42_9 | 14259 | 17393 | + | 1.B.14.6.1 |
| pfam | Rep_357_c_42 | Rep_357_c_42_10 | 17407 | 19326 | + | SusD_RagB | SusD-like_3 |
| TC | Rep_357_c_42 | Rep_357_c_42_11 | 19351 | 22173 | + | 1.B.14.6.1 |
| pfam | Rep_357_c_42 | Rep_357_c_42_12 | 22194 | 23951 | + | SusD_RagB | SusD-like_3 |
| pfam | Rep_357_c_42 | Rep_357_c_42_13 | 23986 | 25059 | + | BT_3987-like_N | DUF5627 |
| CAZyme | Rep_357_c_42 | Rep_357_c_42_14 | 25073 | 27187 | + | GH10 |
| CAZyme | Rep_357_c_42 | Rep_357_c_42_15 | 27327 | 28457 | + | CE1 |
| CAZyme | Rep_357_c_42 | Rep_357_c_42_16 | 28473 | 29846 | + | CBM6 | GH43_29 |
| CAZyme | Rep_357_c_42 | Rep_357_c_42_17 | 29856 | 31916 | + | GH5_21 |
| CAZyme | Rep_357_c_42 | Rep_357_c_42_18 | 31929 | 33386 | + | CE6 |
| CAZyme | Rep_357_c_42 | Rep_357_c_42_19 | 33383 | 35350 | + | GH97 |
| TC | Rep_357_c_42 | Rep_357_c_42_20 | 35368 | 36768 | + | 2.A.2.3.2 |
| CAZyme | Rep_357_c_42 | Rep_357_c_42_21 | 36793 | 37899 | + | GH10 |
| CAZyme | Rep_357_c_42 | Rep_357_c_42_22 | 37916 | 38908 | + | GH43_1 |
Gene ID: Rep_357_c_42_2
Type: CAZyme
Location: 657 - 1985 (-)
Type: CAZyme
Location: 657 - 1985 (-)
Gene ID: Rep_357_c_42_3
Type: CAZyme
Location: 1989 - 4565 (-)
Type: CAZyme
Location: 1989 - 4565 (-)
Gene ID: Rep_357_c_42_4
Type: STP
Location: 4817 - 7969 (+)
Type: STP
Location: 4817 - 7969 (+)
Gene ID: Rep_357_c_42_5
Type: TF
Location: 7966 - 8841 (+)
Type: TF
Location: 7966 - 8841 (+)
Gene ID: Rep_357_c_42_6
Type: CAZyme
Location: 8838 - 10454 (+)
Type: CAZyme
Location: 8838 - 10454 (+)
Gene ID: Rep_357_c_42_7
Type: CAZyme
Location: 10607 - 12229 (+)
Type: CAZyme
Location: 10607 - 12229 (+)
Gene ID: Rep_357_c_42_8
Type: CAZyme
Location: 12463 - 14181 (+)
Type: CAZyme
Location: 12463 - 14181 (+)
Gene ID: Rep_357_c_42_9
Type: TC
Location: 14259 - 17393 (+)
Type: TC
Location: 14259 - 17393 (+)
Gene ID: Rep_357_c_42_10
Type: pfam
Location: 17407 - 19326 (+)
Type: pfam
Location: 17407 - 19326 (+)
Gene ID: Rep_357_c_42_11
Type: TC
Location: 19351 - 22173 (+)
Type: TC
Location: 19351 - 22173 (+)
Gene ID: Rep_357_c_42_12
Type: pfam
Location: 22194 - 23951 (+)
Type: pfam
Location: 22194 - 23951 (+)
Gene ID: Rep_357_c_42_13
Type: pfam
Location: 23986 - 25059 (+)
Type: pfam
Location: 23986 - 25059 (+)
Gene ID: Rep_357_c_42_14
Type: CAZyme
Location: 25073 - 27187 (+)
Type: CAZyme
Location: 25073 - 27187 (+)
Gene ID: Rep_357_c_42_15
Type: CAZyme
Location: 27327 - 28457 (+)
Type: CAZyme
Location: 27327 - 28457 (+)
Gene ID: Rep_357_c_42_16
Type: CAZyme
Location: 28473 - 29846 (+)
Type: CAZyme
Location: 28473 - 29846 (+)
Gene ID: Rep_357_c_42_17
Type: CAZyme
Location: 29856 - 31916 (+)
Type: CAZyme
Location: 29856 - 31916 (+)
Gene ID: Rep_357_c_42_18
Type: CAZyme
Location: 31929 - 33386 (+)
Type: CAZyme
Location: 31929 - 33386 (+)
Gene ID: Rep_357_c_42_19
Type: CAZyme
Location: 33383 - 35350 (+)
Type: CAZyme
Location: 33383 - 35350 (+)
Gene ID: Rep_357_c_42_20
Type: TC
Location: 35368 - 36768 (+)
Type: TC
Location: 35368 - 36768 (+)
Gene ID: Rep_357_c_42_21
Type: CAZyme
Location: 36793 - 37899 (+)
Type: CAZyme
Location: 36793 - 37899 (+)
Gene ID: Rep_357_c_42_22
Type: CAZyme
Location: 37916 - 38908 (+)
Type: CAZyme
Location: 37916 - 38908 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Species
CAG-873 sp905202215
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.