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Cluster: Rep_357_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_357_c_40 Rep_357_c_40_1 3 2858 - CBM51 | GH27
NULL(UNKNOWN) Rep_357_c_40 Rep_357_c_40_2 3098 4756 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_357_c_40 Rep_357_c_40_3 4864 6351 + GH43_9
TC Rep_357_c_40 Rep_357_c_40_4 6374 8203 - 2.A.16.2.2
NULL(UNKNOWN) Rep_357_c_40 Rep_357_c_40_5 8297 8737 - NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_357_c_40 Rep_357_c_40_6 8847 9995 + NTP_transf_4
TC Rep_357_c_40 Rep_357_c_40_7 10036 10668 + 2.A.115.2.14
CAZyme Rep_357_c_40 Rep_357_c_40_8 10665 11474 + CE1
Gene ID: Rep_357_c_40_1
Type: CAZyme
Location: 3 - 2858 (-)
Gene ID: Rep_357_c_40_2
Type:
Location: 3098 - 4756 (+)
Gene ID: Rep_357_c_40_3
Type: CAZyme
Location: 4864 - 6351 (+)
Gene ID: Rep_357_c_40_4
Type: TC
Location: 6374 - 8203 (-)
Gene ID: Rep_357_c_40_5
Type:
Location: 8297 - 8737 (-)
Gene ID: Rep_357_c_40_6
Type: pfam
Location: 8847 - 9995 (+)
Gene ID: Rep_357_c_40_7
Type: TC
Location: 10036 - 10668 (+)
Gene ID: Rep_357_c_40_8
Type: CAZyme
Location: 10665 - 11474 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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