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Cluster: Rep_357_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_357_c_1 Rep_357_c_1_5 4412 5182 + 3.A.1.204.9
pfam Rep_357_c_1 Rep_357_c_1_6 5169 6548 + SUFBD_core | SufBD_N
pfam Rep_357_c_1 Rep_357_c_1_7 6545 7768 + Aminotran_5
CAZyme Rep_357_c_1 Rep_357_c_1_8 7765 9756 - GH115
Gene ID: Rep_357_c_1_5
Type: TC
Location: 4412 - 5182 (+)
Gene ID: Rep_357_c_1_6
Type: pfam
Location: 5169 - 6548 (+)
Gene ID: Rep_357_c_1_7
Type: pfam
Location: 6545 - 7768 (+)
Gene ID: Rep_357_c_1_8
Type: CAZyme
Location: 7765 - 9756 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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