Cluster: Rep_3577_CGC30
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3577
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3577_c_51 | Rep_3577_c_51_1 | 3 | 3149 | - | GH31 |
| pfam | Rep_3577_c_51 | Rep_3577_c_51_2 | 3168 | 5201 | - | Yip1 |
| TC | Rep_3577_c_51 | Rep_3577_c_51_3 | 5218 | 6108 | - | 3.A.1.1.39 |
| TC | Rep_3577_c_51 | Rep_3577_c_51_4 | 6129 | 7022 | - | 3.A.1.1.34 |
Gene ID: Rep_3577_c_51_1
Type: CAZyme
Location: 3 - 3149 (-)
Type: CAZyme
Location: 3 - 3149 (-)
Gene ID: Rep_3577_c_51_2
Type: pfam
Location: 3168 - 5201 (-)
Type: pfam
Location: 3168 - 5201 (-)
Gene ID: Rep_3577_c_51_3
Type: TC
Location: 5218 - 6108 (-)
Type: TC
Location: 5218 - 6108 (-)
Gene ID: Rep_3577_c_51_4
Type: TC
Location: 6129 - 7022 (-)
Type: TC
Location: 6129 - 7022 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA737
Species
UBA737 sp900547305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3577_c_51_1 | vegetarian > vegan | 2.16418 | 0.00207 |
| Rep_3577_c_51_2 | vegetarian > vegan | 1.50356 | 0.00207 |
| Rep_3577_c_51_3 | vegetarian > vegan | 3.53450 | 0.00207 |
| Rep_3577_c_51_4 | vegetarian > vegan | 2.01626 | 0.00207 |