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Cluster: Rep_3577_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3577_c_14 Rep_3577_c_14_12 13243 14775 + 2.A.25.1.9
STP Rep_3577_c_14 Rep_3577_c_14_13 14867 16375 + CBS
CAZyme Rep_3577_c_14 Rep_3577_c_14_14 16375 17352 + GT2
pfam Rep_3577_c_14 Rep_3577_c_14_15 17339 18022 + RelA_SpoT
TC Rep_3577_c_14 Rep_3577_c_14_16 18104 19384 + 1.A.34.1.3
Gene ID: Rep_3577_c_14_12
Type: TC
Location: 13243 - 14775 (+)
Gene ID: Rep_3577_c_14_13
Type: STP
Location: 14867 - 16375 (+)
Gene ID: Rep_3577_c_14_14
Type: CAZyme
Location: 16375 - 17352 (+)
Gene ID: Rep_3577_c_14_15
Type: pfam
Location: 17339 - 18022 (+)
Gene ID: Rep_3577_c_14_16
Type: TC
Location: 18104 - 19384 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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