Cluster: Rep_3577_CGC13
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_3577
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3577_c_8 | Rep_3577_c_8_24 | 26177 | 28000 | - | 8.A.59.2.1 |
| CAZyme | Rep_3577_c_8 | Rep_3577_c_8_25 | 28207 | 36510 | + | CBM67 |
| STP | Rep_3577_c_8 | Rep_3577_c_8_26 | 36577 | 38064 | + | SBP_bac_1 |
| pfam | Rep_3577_c_8 | Rep_3577_c_8_27 | 38097 | 39035 | + | BPD_transp_1 |
| TC | Rep_3577_c_8 | Rep_3577_c_8_28 | 39028 | 39894 | + | 3.A.1.1.18 |
| pfam | Rep_3577_c_8 | Rep_3577_c_8_29 | 39919 | 43521 | + | Dockerin_1 | CBM_4_9 | Y_phosphatase3 |
| NULL(UNKNOWN) | Rep_3577_c_8 | Rep_3577_c_8_30 | 43596 | 46016 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3577_c_8 | Rep_3577_c_8_31 | 46076 | 47566 | + | GH78 |
| CAZyme | Rep_3577_c_8 | Rep_3577_c_8_32 | 47568 | 49145 | + | GH36 |
| CAZyme | Rep_3577_c_8 | Rep_3577_c_8_33 | 49157 | 50455 | + | GH109 |
Gene ID: Rep_3577_c_8_24
Type: TC
Location: 26177 - 28000 (-)
Type: TC
Location: 26177 - 28000 (-)
Gene ID: Rep_3577_c_8_25
Type: CAZyme
Location: 28207 - 36510 (+)
Type: CAZyme
Location: 28207 - 36510 (+)
Gene ID: Rep_3577_c_8_26
Type: STP
Location: 36577 - 38064 (+)
Type: STP
Location: 36577 - 38064 (+)
Gene ID: Rep_3577_c_8_27
Type: pfam
Location: 38097 - 39035 (+)
Type: pfam
Location: 38097 - 39035 (+)
Gene ID: Rep_3577_c_8_28
Type: TC
Location: 39028 - 39894 (+)
Type: TC
Location: 39028 - 39894 (+)
Gene ID: Rep_3577_c_8_29
Type: pfam
Location: 39919 - 43521 (+)
Type: pfam
Location: 39919 - 43521 (+)
Gene ID: Rep_3577_c_8_30
Type:
Location: 43596 - 46016 (+)
Type:
Location: 43596 - 46016 (+)
Gene ID: Rep_3577_c_8_31
Type: CAZyme
Location: 46076 - 47566 (+)
Type: CAZyme
Location: 46076 - 47566 (+)
Gene ID: Rep_3577_c_8_32
Type: CAZyme
Location: 47568 - 49145 (+)
Type: CAZyme
Location: 47568 - 49145 (+)
Gene ID: Rep_3577_c_8_33
Type: CAZyme
Location: 49157 - 50455 (+)
Type: CAZyme
Location: 49157 - 50455 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA737
Species
UBA737 sp900547305
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_3577_c_8_25 | vegetarian > vegan | 2.22721 | 0.00207 |
| Rep_3577_c_8_26 | vegetarian > vegan | 4.23077 | 0.00207 |
| Rep_3577_c_8_27 | vegetarian > vegan | 3.58254 | 0.00207 |
| Rep_3577_c_8_28 | vegetarian > vegan | 2.93111 | 0.00207 |
| Rep_3577_c_8_29 | vegetarian > vegan | 2.05332 | 0.00207 |
| Rep_3577_c_8_31 | vegetarian > vegan | 1.46898 | 0.00207 |
| Rep_3577_c_8_32 | vegetarian > vegan | 1.96161 | 0.00207 |
| Rep_3577_c_8_33 | vegetarian > vegan | 2.97021 | 0.00207 |