dbCAN Logo

Cluster: Rep_3577_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3577_c_7 Rep_3577_c_7_7 4251 6122 - GH129
TF Rep_3577_c_7 Rep_3577_c_7_8 6115 7014 - HTH_AraC | HTH_AraC
pfam Rep_3577_c_7 Rep_3577_c_7_9 7299 8825 + Dockerin_1
CAZyme Rep_3577_c_7 Rep_3577_c_7_10 9088 10746 + GH163
CAZyme Rep_3577_c_7 Rep_3577_c_7_11 10763 12715 + GH163
TC Rep_3577_c_7 Rep_3577_c_7_12 12737 14491 + 3.A.1.1.9
NULL(UNKNOWN) Rep_3577_c_7 Rep_3577_c_7_13 14533 23349 + NULL(UNKNOWN)
[View Structural Homologs]
STP Rep_3577_c_7 Rep_3577_c_7_14 23379 26225 + SBP_bac_1
TC Rep_3577_c_7 Rep_3577_c_7_15 26222 27112 + 3.A.1.1.12
TC Rep_3577_c_7 Rep_3577_c_7_16 27122 28009 + 3.A.1.1.39
pfam Rep_3577_c_7 Rep_3577_c_7_17 28021 30069 + NHL | Yip1
pfam Rep_3577_c_7 Rep_3577_c_7_18 30081 32240 + DUF5696
TC Rep_3577_c_7 Rep_3577_c_7_19 32233 33129 + 3.A.1.1.20
TC Rep_3577_c_7 Rep_3577_c_7_20 33131 34075 + 3.A.1.1.4
STP Rep_3577_c_7 Rep_3577_c_7_21 34135 36126 + TPR_1
CAZyme Rep_3577_c_7 Rep_3577_c_7_22 36131 38191 + GH36
Gene ID: Rep_3577_c_7_7
Type: CAZyme
Location: 4251 - 6122 (-)
Gene ID: Rep_3577_c_7_8
Type: TF
Location: 6115 - 7014 (-)
Gene ID: Rep_3577_c_7_9
Type: pfam
Location: 7299 - 8825 (+)
Gene ID: Rep_3577_c_7_10
Type: CAZyme
Location: 9088 - 10746 (+)
Gene ID: Rep_3577_c_7_11
Type: CAZyme
Location: 10763 - 12715 (+)
Gene ID: Rep_3577_c_7_12
Type: TC
Location: 12737 - 14491 (+)
Gene ID: Rep_3577_c_7_13
Type:
Location: 14533 - 23349 (+)
Gene ID: Rep_3577_c_7_14
Type: STP
Location: 23379 - 26225 (+)
Gene ID: Rep_3577_c_7_15
Type: TC
Location: 26222 - 27112 (+)
Gene ID: Rep_3577_c_7_16
Type: TC
Location: 27122 - 28009 (+)
Gene ID: Rep_3577_c_7_17
Type: pfam
Location: 28021 - 30069 (+)
Gene ID: Rep_3577_c_7_18
Type: pfam
Location: 30081 - 32240 (+)
Gene ID: Rep_3577_c_7_19
Type: TC
Location: 32233 - 33129 (+)
Gene ID: Rep_3577_c_7_20
Type: TC
Location: 33131 - 34075 (+)
Gene ID: Rep_3577_c_7_21
Type: STP
Location: 34135 - 36126 (+)
Gene ID: Rep_3577_c_7_22
Type: CAZyme
Location: 36131 - 38191 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List