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Cluster: Rep_3573_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3573_c_8 Rep_3573_c_8_41 49623 51410 + GH136
NULL(UNKNOWN) Rep_3573_c_8 Rep_3573_c_8_42 51427 52677 + NULL(UNKNOWN)
[View Structural Homologs]
STP Rep_3573_c_8 Rep_3573_c_8_43 52705 55584 + SBP_bac_1
TC Rep_3573_c_8 Rep_3573_c_8_44 55581 56495 + 3.A.1.1.11
TC Rep_3573_c_8 Rep_3573_c_8_45 56519 57412 + 3.A.1.1.39
Gene ID: Rep_3573_c_8_41
Type: CAZyme
Location: 49623 - 51410 (+)
Gene ID: Rep_3573_c_8_42
Type:
Location: 51427 - 52677 (+)
Gene ID: Rep_3573_c_8_43
Type: STP
Location: 52705 - 55584 (+)
Gene ID: Rep_3573_c_8_44
Type: TC
Location: 55581 - 56495 (+)
Gene ID: Rep_3573_c_8_45
Type: TC
Location: 56519 - 57412 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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