Cluster: Rep_3573_CGC12
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_3573
- CGC Family ID: CGCFAM_10878
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3573_c_13 | Rep_3573_c_13_8 | 11382 | 13718 | - | GH2 |
| pfam | Rep_3573_c_13 | Rep_3573_c_13_9 | 13715 | 14527 | - | Polysacc_deac_1 |
| CAZyme | Rep_3573_c_13 | Rep_3573_c_13_10 | 14617 | 15645 | - | GH26 |
| TC | Rep_3573_c_13 | Rep_3573_c_13_11 | 15681 | 16637 | - | 3.A.1.1.11 |
| TC | Rep_3573_c_13 | Rep_3573_c_13_12 | 16641 | 17555 | - | 3.A.1.1.20 |
| pfam | Rep_3573_c_13 | Rep_3573_c_13_13 | 17602 | 19884 | - | DUF5696 |
| pfam | Rep_3573_c_13 | Rep_3573_c_13_14 | 19908 | 22031 | - | NHL | Yip1 | TPR_19 |
| TC | Rep_3573_c_13 | Rep_3573_c_13_15 | 22051 | 22947 | - | 3.A.1.1.39 |
| TC | Rep_3573_c_13 | Rep_3573_c_13_16 | 22961 | 23890 | - | 3.A.1.1.11 |
| STP | Rep_3573_c_13 | Rep_3573_c_13_17 | 23925 | 26762 | - | SBP_bac_1 |
| CAZyme | Rep_3573_c_13 | Rep_3573_c_13_18 | 26781 | 29258 | - | CBM67 | GH78 |
| CAZyme | Rep_3573_c_13 | Rep_3573_c_13_19 | 29279 | 31393 | - | GH26 |
Gene ID: Rep_3573_c_13_8
Type: CAZyme
Location: 11382 - 13718 (-)
Type: CAZyme
Location: 11382 - 13718 (-)
Gene ID: Rep_3573_c_13_9
Type: pfam
Location: 13715 - 14527 (-)
Type: pfam
Location: 13715 - 14527 (-)
Gene ID: Rep_3573_c_13_10
Type: CAZyme
Location: 14617 - 15645 (-)
Type: CAZyme
Location: 14617 - 15645 (-)
Gene ID: Rep_3573_c_13_11
Type: TC
Location: 15681 - 16637 (-)
Type: TC
Location: 15681 - 16637 (-)
Gene ID: Rep_3573_c_13_12
Type: TC
Location: 16641 - 17555 (-)
Type: TC
Location: 16641 - 17555 (-)
Gene ID: Rep_3573_c_13_13
Type: pfam
Location: 17602 - 19884 (-)
Type: pfam
Location: 17602 - 19884 (-)
Gene ID: Rep_3573_c_13_14
Type: pfam
Location: 19908 - 22031 (-)
Type: pfam
Location: 19908 - 22031 (-)
Gene ID: Rep_3573_c_13_15
Type: TC
Location: 22051 - 22947 (-)
Type: TC
Location: 22051 - 22947 (-)
Gene ID: Rep_3573_c_13_16
Type: TC
Location: 22961 - 23890 (-)
Type: TC
Location: 22961 - 23890 (-)
Gene ID: Rep_3573_c_13_17
Type: STP
Location: 23925 - 26762 (-)
Type: STP
Location: 23925 - 26762 (-)
Gene ID: Rep_3573_c_13_18
Type: CAZyme
Location: 26781 - 29258 (-)
Type: CAZyme
Location: 26781 - 29258 (-)
Gene ID: Rep_3573_c_13_19
Type: CAZyme
Location: 29279 - 31393 (-)
Type: CAZyme
Location: 29279 - 31393 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA737
Species
UBA737 sp900543215
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.