Cluster: Rep_356_CGC4
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 7
- Substrate:
- Genome ID: Rep_356
- CGC Family ID: CGCFAM_00544
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_356_c_0 | Rep_356_c_0_143 | 192868 | 194880 | + | 3.A.16.1.1 |
| pfam | Rep_356_c_0 | Rep_356_c_0_144 | 194950 | 196689 | + | GmrSD_N |
| pfam | Rep_356_c_0 | Rep_356_c_0_145 | 196694 | 198838 | + | GmrSD_N |
| CAZyme | Rep_356_c_0 | Rep_356_c_0_146 | 198992 | 201133 | - | GH36 |
| TF | Rep_356_c_0 | Rep_356_c_0_147 | 201308 | 205315 | - | HTH_AraC | HTH_AraC |
| CAZyme | Rep_356_c_0 | Rep_356_c_0_148 | 205320 | 207491 | - | GH92 |
| CAZyme | Rep_356_c_0 | Rep_356_c_0_149 | 207513 | 209918 | - | GH36 |
| pfam | Rep_356_c_0 | Rep_356_c_0_150 | 210097 | 211821 | - | FG-GAP_3 | FG-GAP_3 | FG-GAP_3 | FG-GAP_3 |
| pfam | Rep_356_c_0 | Rep_356_c_0_151 | 212032 | 213594 | - | SusD_RagB | SusD-like_3 |
| TC | Rep_356_c_0 | Rep_356_c_0_152 | 213640 | 216753 | - | 1.B.14.6.1 |
| CAZyme | Rep_356_c_0 | Rep_356_c_0_153 | 216885 | 219452 | - | GH2 |
| CAZyme | Rep_356_c_0 | Rep_356_c_0_154 | 219449 | 221788 | - | GH95 |
| CAZyme | Rep_356_c_0 | Rep_356_c_0_155 | 221981 | 223903 | + | CE20 | CE20 |
| CAZyme | Rep_356_c_0 | Rep_356_c_0_156 | 223914 | 226664 | + | GH92 |
| sulfatase | Rep_356_c_0 | Rep_356_c_0_157 | 226679 | 227707 | + | S1_22 |
| STP | Rep_356_c_0 | Rep_356_c_0_158 | 227823 | 231116 | - | TPR_1 |
| TC | Rep_356_c_0 | Rep_356_c_0_159 | 231323 | 232744 | - | 2.A.1.1.55 |
Gene ID: Rep_356_c_0_143
Type: TC
Location: 192868 - 194880 (+)
Type: TC
Location: 192868 - 194880 (+)
Gene ID: Rep_356_c_0_144
Type: pfam
Location: 194950 - 196689 (+)
Type: pfam
Location: 194950 - 196689 (+)
Gene ID: Rep_356_c_0_145
Type: pfam
Location: 196694 - 198838 (+)
Type: pfam
Location: 196694 - 198838 (+)
Gene ID: Rep_356_c_0_146
Type: CAZyme
Location: 198992 - 201133 (-)
Type: CAZyme
Location: 198992 - 201133 (-)
Gene ID: Rep_356_c_0_147
Type: TF
Location: 201308 - 205315 (-)
Type: TF
Location: 201308 - 205315 (-)
Gene ID: Rep_356_c_0_148
Type: CAZyme
Location: 205320 - 207491 (-)
Type: CAZyme
Location: 205320 - 207491 (-)
Gene ID: Rep_356_c_0_149
Type: CAZyme
Location: 207513 - 209918 (-)
Type: CAZyme
Location: 207513 - 209918 (-)
Gene ID: Rep_356_c_0_150
Type: pfam
Location: 210097 - 211821 (-)
Type: pfam
Location: 210097 - 211821 (-)
Gene ID: Rep_356_c_0_151
Type: pfam
Location: 212032 - 213594 (-)
Type: pfam
Location: 212032 - 213594 (-)
Gene ID: Rep_356_c_0_152
Type: TC
Location: 213640 - 216753 (-)
Type: TC
Location: 213640 - 216753 (-)
Gene ID: Rep_356_c_0_153
Type: CAZyme
Location: 216885 - 219452 (-)
Type: CAZyme
Location: 216885 - 219452 (-)
Gene ID: Rep_356_c_0_154
Type: CAZyme
Location: 219449 - 221788 (-)
Type: CAZyme
Location: 219449 - 221788 (-)
Gene ID: Rep_356_c_0_155
Type: CAZyme
Location: 221981 - 223903 (+)
Type: CAZyme
Location: 221981 - 223903 (+)
Gene ID: Rep_356_c_0_156
Type: CAZyme
Location: 223914 - 226664 (+)
Type: CAZyme
Location: 223914 - 226664 (+)
Gene ID: Rep_356_c_0_157
Type: sulfatase
Location: 226679 - 227707 (+)
Type: sulfatase
Location: 226679 - 227707 (+)
Gene ID: Rep_356_c_0_158
Type: STP
Location: 227823 - 231116 (-)
Type: STP
Location: 227823 - 231116 (-)
Gene ID: Rep_356_c_0_159
Type: TC
Location: 231323 - 232744 (-)
Type: TC
Location: 231323 - 232744 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Species
CAG-873 sp009775195
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.