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Cluster: Rep_356_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_356_c_23 Rep_356_c_23_1 240 2063 - GH36
NULL(UNKNOWN) Rep_356_c_23 Rep_356_c_23_2 2192 3994 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_356_c_23 Rep_356_c_23_3 4129 5046 - GH43_17
CAZyme Rep_356_c_23 Rep_356_c_23_4 5116 7650 - GH30_5
CAZyme Rep_356_c_23 Rep_356_c_23_5 7659 9941 - GH3
NULL(UNKNOWN) Rep_356_c_23 Rep_356_c_23_6 10090 12162 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_356_c_23 Rep_356_c_23_7 12181 13191 - GH43_18
pfam Rep_356_c_23 Rep_356_c_23_8 13218 14837 - SusD_RagB | SusD-like_3
TC Rep_356_c_23 Rep_356_c_23_9 14892 18320 - 1.B.14.6.1
Gene ID: Rep_356_c_23_1
Type: CAZyme
Location: 240 - 2063 (-)
Gene ID: Rep_356_c_23_2
Type:
Location: 2192 - 3994 (-)
Gene ID: Rep_356_c_23_3
Type: CAZyme
Location: 4129 - 5046 (-)
Gene ID: Rep_356_c_23_4
Type: CAZyme
Location: 5116 - 7650 (-)
Gene ID: Rep_356_c_23_5
Type: CAZyme
Location: 7659 - 9941 (-)
Gene ID: Rep_356_c_23_6
Type:
Location: 10090 - 12162 (-)
Gene ID: Rep_356_c_23_7
Type: CAZyme
Location: 12181 - 13191 (-)
Gene ID: Rep_356_c_23_8
Type: pfam
Location: 13218 - 14837 (-)
Gene ID: Rep_356_c_23_9
Type: TC
Location: 14892 - 18320 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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