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Cluster: Rep_356_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_356_c_22 Rep_356_c_22_54 52090 52977 + 2.A.1.3.24
TC Rep_356_c_22 Rep_356_c_22_55 52974 53888 + 3.A.1.105.4
TC Rep_356_c_22 Rep_356_c_22_56 53878 54621 + 3.A.1.105.4
TC Rep_356_c_22 Rep_356_c_22_57 54644 55672 + 3.A.1.105.15
TC Rep_356_c_22 Rep_356_c_22_58 55683 56792 + 3.A.1.105.4
pfam Rep_356_c_22 Rep_356_c_22_59 56880 58469 + SLFN_AlbA_2 | HTH_24 | HATPase_c_4
CAZyme Rep_356_c_22 Rep_356_c_22_60 58561 60153 + GH43_18
Gene ID: Rep_356_c_22_54
Type: TC
Location: 52090 - 52977 (+)
Gene ID: Rep_356_c_22_55
Type: TC
Location: 52974 - 53888 (+)
Gene ID: Rep_356_c_22_56
Type: TC
Location: 53878 - 54621 (+)
Gene ID: Rep_356_c_22_57
Type: TC
Location: 54644 - 55672 (+)
Gene ID: Rep_356_c_22_58
Type: TC
Location: 55683 - 56792 (+)
Gene ID: Rep_356_c_22_59
Type: pfam
Location: 56880 - 58469 (+)
Gene ID: Rep_356_c_22_60
Type: CAZyme
Location: 58561 - 60153 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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