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Cluster: Rep_356_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_356_c_16 Rep_356_c_16_32 40303 41691 + 2.A.66.1.32
pfam Rep_356_c_16 Rep_356_c_16_33 41684 43258 + FAD_binding_2 | FAD_binding_3 | FAD-depend_C
pfam Rep_356_c_16 Rep_356_c_16_34 43534 43995 + NDK
CAZyme Rep_356_c_16 Rep_356_c_16_35 44064 45035 + CBM50
pfam Rep_356_c_16 Rep_356_c_16_36 45174 46277 + MMR_HSR1 | FeoB_N | YchF-GTPase_C
TC Rep_356_c_16 Rep_356_c_16_37 46562 48739 - 1.B.14.8.2
TC Rep_356_c_16 Rep_356_c_16_38 48760 50619 - 3.A.1.120.6
TC Rep_356_c_16 Rep_356_c_16_39 50632 51429 - 1.A.16.2.2
Gene ID: Rep_356_c_16_32
Type: TC
Location: 40303 - 41691 (+)
Gene ID: Rep_356_c_16_33
Type: pfam
Location: 41684 - 43258 (+)
Gene ID: Rep_356_c_16_34
Type: pfam
Location: 43534 - 43995 (+)
Gene ID: Rep_356_c_16_35
Type: CAZyme
Location: 44064 - 45035 (+)
Gene ID: Rep_356_c_16_36
Type: pfam
Location: 45174 - 46277 (+)
Gene ID: Rep_356_c_16_37
Type: TC
Location: 46562 - 48739 (-)
Gene ID: Rep_356_c_16_38
Type: TC
Location: 48760 - 50619 (-)
Gene ID: Rep_356_c_16_39
Type: TC
Location: 50632 - 51429 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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