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Cluster: Rep_356_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_356_c_14 Rep_356_c_14_44 47594 50320 + 1.B.14.14.1
NULL(UNKNOWN) Rep_356_c_14 Rep_356_c_14_45 50334 52328 + NULL(UNKNOWN)
[View Structural Homologs]
pfam Rep_356_c_14 Rep_356_c_14_46 52455 53243 + Hexapep | Hexapep | Acetyltransf_11
CAZyme Rep_356_c_14 Rep_356_c_14_47 53209 54321 - GT4
pfam Rep_356_c_14 Rep_356_c_14_48 54412 55461 + Radical_SAM | SPASM
CAZyme Rep_356_c_14 Rep_356_c_14_49 55458 56543 + GT4
Gene ID: Rep_356_c_14_44
Type: TC
Location: 47594 - 50320 (+)
Gene ID: Rep_356_c_14_45
Type:
Location: 50334 - 52328 (+)
Gene ID: Rep_356_c_14_46
Type: pfam
Location: 52455 - 53243 (+)
Gene ID: Rep_356_c_14_47
Type: CAZyme
Location: 53209 - 54321 (-)
Gene ID: Rep_356_c_14_48
Type: pfam
Location: 54412 - 55461 (+)
Gene ID: Rep_356_c_14_49
Type: CAZyme
Location: 55458 - 56543 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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