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Cluster: Rep_356_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_356_c_5 Rep_356_c_5_57 71836 73200 + 9.B.145.1.2
CAZyme Rep_356_c_5 Rep_356_c_5_58 73202 74803 + GT83
pfam Rep_356_c_5 Rep_356_c_5_59 74891 75412 + Ferritin
pfam Rep_356_c_5 Rep_356_c_5_60 75521 76450 + EamA | EamA
TC Rep_356_c_5 Rep_356_c_5_61 76458 77897 - 2.A.66.1.36
peptidase Rep_356_c_5 Rep_356_c_5_62 77954 81202 + S41.UPB
NULL(UNKNOWN) Rep_356_c_5 Rep_356_c_5_63 81210 82049 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_356_c_5 Rep_356_c_5_64 82080 84497 + GH2
Gene ID: Rep_356_c_5_57
Type: TC
Location: 71836 - 73200 (+)
Gene ID: Rep_356_c_5_58
Type: CAZyme
Location: 73202 - 74803 (+)
Gene ID: Rep_356_c_5_59
Type: pfam
Location: 74891 - 75412 (+)
Gene ID: Rep_356_c_5_60
Type: pfam
Location: 75521 - 76450 (+)
Gene ID: Rep_356_c_5_61
Type: TC
Location: 76458 - 77897 (-)
Gene ID: Rep_356_c_5_62
Type: peptidase
Location: 77954 - 81202 (+)
Gene ID: Rep_356_c_5_63
Type:
Location: 81210 - 82049 (+)
Gene ID: Rep_356_c_5_64
Type: CAZyme
Location: 82080 - 84497 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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