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Cluster: Rep_356_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_356_c_5 Rep_356_c_5_46 58490 61204 - 4.A.2.1.17
TC Rep_356_c_5 Rep_356_c_5_47 61417 62724 - 3.D.5.1.1
TC Rep_356_c_5 Rep_356_c_5_48 62747 63364 - 3.D.5.1.1
TC Rep_356_c_5 Rep_356_c_5_49 63394 64008 - 3.D.5.1.1
TC Rep_356_c_5 Rep_356_c_5_50 64022 64735 - 3.D.5.1.1
TC Rep_356_c_5 Rep_356_c_5_51 64732 65952 - 3.D.5.1.1
TC Rep_356_c_5 Rep_356_c_5_52 65954 67291 - 3.D.5.1.1
CAZyme Rep_356_c_5 Rep_356_c_5_53 67493 68470 + GH25
Gene ID: Rep_356_c_5_46
Type: TC
Location: 58490 - 61204 (-)
Gene ID: Rep_356_c_5_47
Type: TC
Location: 61417 - 62724 (-)
Gene ID: Rep_356_c_5_48
Type: TC
Location: 62747 - 63364 (-)
Gene ID: Rep_356_c_5_49
Type: TC
Location: 63394 - 64008 (-)
Gene ID: Rep_356_c_5_50
Type: TC
Location: 64022 - 64735 (-)
Gene ID: Rep_356_c_5_51
Type: TC
Location: 64732 - 65952 (-)
Gene ID: Rep_356_c_5_52
Type: TC
Location: 65954 - 67291 (-)
Gene ID: Rep_356_c_5_53
Type: CAZyme
Location: 67493 - 68470 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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