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Cluster: Rep_356_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_356_c_3 Rep_356_c_3_105 120105 120800 + 1.B.44.1.2
pfam Rep_356_c_3 Rep_356_c_3_106 120797 121786 + PorP_SprF
TC Rep_356_c_3 Rep_356_c_3_107 121854 123302 + 9.A.25.1.1
TC Rep_356_c_3 Rep_356_c_3_108 123352 124278 + 9.A.25.1.1
TC Rep_356_c_3 Rep_356_c_3_109 124300 125865 + 9.A.25.1.1
pfam Rep_356_c_3 Rep_356_c_3_110 125882 127030 + GldN
TC Rep_356_c_3 Rep_356_c_3_111 127032 128183 + 2.A.1.2.14
CAZyme Rep_356_c_3 Rep_356_c_3_112 128290 130554 - GH3
Gene ID: Rep_356_c_3_105
Type: TC
Location: 120105 - 120800 (+)
Gene ID: Rep_356_c_3_106
Type: pfam
Location: 120797 - 121786 (+)
Gene ID: Rep_356_c_3_107
Type: TC
Location: 121854 - 123302 (+)
Gene ID: Rep_356_c_3_108
Type: TC
Location: 123352 - 124278 (+)
Gene ID: Rep_356_c_3_109
Type: TC
Location: 124300 - 125865 (+)
Gene ID: Rep_356_c_3_110
Type: pfam
Location: 125882 - 127030 (+)
Gene ID: Rep_356_c_3_111
Type: TC
Location: 127032 - 128183 (+)
Gene ID: Rep_356_c_3_112
Type: CAZyme
Location: 128290 - 130554 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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