Cluster: Rep_3569_CGC6
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_3569
- CGC Family ID: CGCFAM_00002
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3569_c_46 | Rep_3569_c_46_1 | 1 | 1245 | - | 2.A.66.5.3 |
| NULL(UNKNOWN) | Rep_3569_c_46 | Rep_3569_c_46_2 | 1226 | 1768 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3569_c_46 | Rep_3569_c_46_3 | 1804 | 2958 | - | GT4 |
| NULL(UNKNOWN) | Rep_3569_c_46 | Rep_3569_c_46_4 | 2972 | 3670 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_3569_c_46 | Rep_3569_c_46_5 | 3622 | 4152 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3569_c_46 | Rep_3569_c_46_6 | 4140 | 5375 | - | GT4 |
| pfam | Rep_3569_c_46 | Rep_3569_c_46_7 | 5424 | 6707 | - | Glyco_trans_1_2 |
| CAZyme | Rep_3569_c_46 | Rep_3569_c_46_8 | 6720 | 7730 | - | GT2 |
| pfam | Rep_3569_c_46 | Rep_3569_c_46_9 | 7723 | 8868 | - | PS_pyruv_trans |
| CAZyme | Rep_3569_c_46 | Rep_3569_c_46_10 | 8865 | 9737 | - | GT2 |
| TC | Rep_3569_c_46 | Rep_3569_c_46_11 | 9737 | 10375 | - | 9.B.18.1.2 |
Gene ID: Rep_3569_c_46_1
Type: TC
Location: 1 - 1245 (-)
Type: TC
Location: 1 - 1245 (-)
Gene ID: Rep_3569_c_46_2
Type:
Location: 1226 - 1768 (-)
Type:
Location: 1226 - 1768 (-)
Gene ID: Rep_3569_c_46_3
Type: CAZyme
Location: 1804 - 2958 (-)
Type: CAZyme
Location: 1804 - 2958 (-)
Gene ID: Rep_3569_c_46_4
Type:
Location: 2972 - 3670 (-)
Type:
Location: 2972 - 3670 (-)
Gene ID: Rep_3569_c_46_5
Type:
Location: 3622 - 4152 (-)
Type:
Location: 3622 - 4152 (-)
Gene ID: Rep_3569_c_46_6
Type: CAZyme
Location: 4140 - 5375 (-)
Type: CAZyme
Location: 4140 - 5375 (-)
Gene ID: Rep_3569_c_46_7
Type: pfam
Location: 5424 - 6707 (-)
Type: pfam
Location: 5424 - 6707 (-)
Gene ID: Rep_3569_c_46_8
Type: CAZyme
Location: 6720 - 7730 (-)
Type: CAZyme
Location: 6720 - 7730 (-)
Gene ID: Rep_3569_c_46_9
Type: pfam
Location: 7723 - 8868 (-)
Type: pfam
Location: 7723 - 8868 (-)
Gene ID: Rep_3569_c_46_10
Type: CAZyme
Location: 8865 - 9737 (-)
Type: CAZyme
Location: 8865 - 9737 (-)
Gene ID: Rep_3569_c_46_11
Type: TC
Location: 9737 - 10375 (-)
Type: TC
Location: 9737 - 10375 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA737
Species
UBA737 sp900754145
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.