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Cluster: Rep_3569_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3569_c_27 Rep_3569_c_27_3 1959 4106 - 9.A.8.1.6
STP Rep_3569_c_27 Rep_3569_c_27_4 4191 4412 - FeoA
STP Rep_3569_c_27 Rep_3569_c_27_5 4456 4668 - FeoA
TC Rep_3569_c_27 Rep_3569_c_27_6 4775 6208 - 2.A.66.2.16
pfam Rep_3569_c_27 Rep_3569_c_27_7 6243 7643 - Wzy_C
CAZyme Rep_3569_c_27 Rep_3569_c_27_8 7640 8740 - GT113
CAZyme Rep_3569_c_27 Rep_3569_c_27_9 8740 9837 - GT4
CAZyme Rep_3569_c_27 Rep_3569_c_27_10 9850 10872 - GT2
CAZyme Rep_3569_c_27 Rep_3569_c_27_11 10892 11950 - GT2
Gene ID: Rep_3569_c_27_3
Type: TC
Location: 1959 - 4106 (-)
Gene ID: Rep_3569_c_27_4
Type: STP
Location: 4191 - 4412 (-)
Gene ID: Rep_3569_c_27_5
Type: STP
Location: 4456 - 4668 (-)
Gene ID: Rep_3569_c_27_6
Type: TC
Location: 4775 - 6208 (-)
Gene ID: Rep_3569_c_27_7
Type: pfam
Location: 6243 - 7643 (-)
Gene ID: Rep_3569_c_27_8
Type: CAZyme
Location: 7640 - 8740 (-)
Gene ID: Rep_3569_c_27_9
Type: CAZyme
Location: 8740 - 9837 (-)
Gene ID: Rep_3569_c_27_10
Type: CAZyme
Location: 9850 - 10872 (-)
Gene ID: Rep_3569_c_27_11
Type: CAZyme
Location: 10892 - 11950 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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