Cluster: Rep_3563_CGC24
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3563
- CGC Family ID: CGCFAM_10218
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3563_c_52 | Rep_3563_c_52_1 | 281 | 2098 | - | GH13_39 |
| CAZyme | Rep_3563_c_52 | Rep_3563_c_52_2 | 2102 | 4504 | - | GT35 |
| pfam | Rep_3563_c_52 | Rep_3563_c_52_3 | 4769 | 6301 | - | LysM | SipL | SipL |
| TC | Rep_3563_c_52 | Rep_3563_c_52_4 | 6372 | 8303 | - | 3.A.1.135.5 |
| TC | Rep_3563_c_52 | Rep_3563_c_52_5 | 8293 | 10047 | - | 3.A.1.135.5 |
Gene ID: Rep_3563_c_52_1
Type: CAZyme
Location: 281 - 2098 (-)
Type: CAZyme
Location: 281 - 2098 (-)
Gene ID: Rep_3563_c_52_2
Type: CAZyme
Location: 2102 - 4504 (-)
Type: CAZyme
Location: 2102 - 4504 (-)
Gene ID: Rep_3563_c_52_3
Type: pfam
Location: 4769 - 6301 (-)
Type: pfam
Location: 4769 - 6301 (-)
Gene ID: Rep_3563_c_52_4
Type: TC
Location: 6372 - 8303 (-)
Type: TC
Location: 6372 - 8303 (-)
Gene ID: Rep_3563_c_52_5
Type: TC
Location: 8293 - 10047 (-)
Type: TC
Location: 8293 - 10047 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA737
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.