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Cluster: Rep_3563_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3563_c_48 Rep_3563_c_48_10 8793 9296 - 2.A.87.3.1
pfam Rep_3563_c_48 Rep_3563_c_48_11 9300 9644 - NusG_II
TC Rep_3563_c_48 Rep_3563_c_48_12 9737 10438 - 3.D.6.1.1
TC Rep_3563_c_48 Rep_3563_c_48_13 10442 11044 - 3.D.6.1.2
TC Rep_3563_c_48 Rep_3563_c_48_14 11046 11732 - 3.D.6.1.2
pfam Rep_3563_c_48 Rep_3563_c_48_15 11732 12904 - FMN_bind | FMN_bind
TC Rep_3563_c_48 Rep_3563_c_48_16 12901 13818 - 3.D.6.1.2
TC Rep_3563_c_48 Rep_3563_c_48_17 13819 15123 - 3.D.6.1.2
CAZyme Rep_3563_c_48 Rep_3563_c_48_18 15315 16307 - GT2
STP Rep_3563_c_48 Rep_3563_c_48_19 16414 17331 + NIR_SIR | NIR_SIR_ferr
STP Rep_3563_c_48 Rep_3563_c_48_20 17334 18260 + Peripla_BP_2
TC Rep_3563_c_48 Rep_3563_c_48_21 18217 19233 + 3.A.1.14.16
TC Rep_3563_c_48 Rep_3563_c_48_22 19226 19981 + 3.A.1.14.8
TC Rep_3563_c_48 Rep_3563_c_48_23 20042 20605 - 3.A.1.25.3
TF Rep_3563_c_48 Rep_3563_c_48_24 20897 21745 - HTH_11
pfam Rep_3563_c_48 Rep_3563_c_48_25 21900 22880 - 2-Hacid_dh | 2-Hacid_dh_C
TC Rep_3563_c_48 Rep_3563_c_48_26 23762 26392 - 8.A.7.1.4
Gene ID: Rep_3563_c_48_10
Type: TC
Location: 8793 - 9296 (-)
Gene ID: Rep_3563_c_48_11
Type: pfam
Location: 9300 - 9644 (-)
Gene ID: Rep_3563_c_48_12
Type: TC
Location: 9737 - 10438 (-)
Gene ID: Rep_3563_c_48_13
Type: TC
Location: 10442 - 11044 (-)
Gene ID: Rep_3563_c_48_14
Type: TC
Location: 11046 - 11732 (-)
Gene ID: Rep_3563_c_48_15
Type: pfam
Location: 11732 - 12904 (-)
Gene ID: Rep_3563_c_48_16
Type: TC
Location: 12901 - 13818 (-)
Gene ID: Rep_3563_c_48_17
Type: TC
Location: 13819 - 15123 (-)
Gene ID: Rep_3563_c_48_18
Type: CAZyme
Location: 15315 - 16307 (-)
Gene ID: Rep_3563_c_48_19
Type: STP
Location: 16414 - 17331 (+)
Gene ID: Rep_3563_c_48_20
Type: STP
Location: 17334 - 18260 (+)
Gene ID: Rep_3563_c_48_21
Type: TC
Location: 18217 - 19233 (+)
Gene ID: Rep_3563_c_48_22
Type: TC
Location: 19226 - 19981 (+)
Gene ID: Rep_3563_c_48_23
Type: TC
Location: 20042 - 20605 (-)
Gene ID: Rep_3563_c_48_24
Type: TF
Location: 20897 - 21745 (-)
Gene ID: Rep_3563_c_48_25
Type: pfam
Location: 21900 - 22880 (-)
Gene ID: Rep_3563_c_48_26
Type: TC
Location: 23762 - 26392 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Acutalibacteraceae
→
Genus
UBA737
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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