Cluster: Rep_3563_CGC18
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_3563
- CGC Family ID: CGCFAM_00730
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3563_c_38 | Rep_3563_c_38_7 | 5607 | 8333 | - | 3.A.5.1.3 |
| peptidase | Rep_3563_c_38 | Rep_3563_c_38_8 | 8451 | 10271 | + | C44.001 |
| CAZyme | Rep_3563_c_38 | Rep_3563_c_38_9 | 10370 | 11341 | + | GT2 |
| CAZyme | Rep_3563_c_38 | Rep_3563_c_38_10 | 11357 | 12340 | + | GT2 |
| pfam | Rep_3563_c_38 | Rep_3563_c_38_11 | 12351 | 13829 | + | Wzy_C |
| TC | Rep_3563_c_38 | Rep_3563_c_38_12 | 13840 | 15297 | + | 2.A.66.2.2 |
| CAZyme | Rep_3563_c_38 | Rep_3563_c_38_13 | 15294 | 16235 | + | GT32 |
Gene ID: Rep_3563_c_38_7
Type: TC
Location: 5607 - 8333 (-)
Type: TC
Location: 5607 - 8333 (-)
Gene ID: Rep_3563_c_38_8
Type: peptidase
Location: 8451 - 10271 (+)
Type: peptidase
Location: 8451 - 10271 (+)
Gene ID: Rep_3563_c_38_9
Type: CAZyme
Location: 10370 - 11341 (+)
Type: CAZyme
Location: 10370 - 11341 (+)
Gene ID: Rep_3563_c_38_10
Type: CAZyme
Location: 11357 - 12340 (+)
Type: CAZyme
Location: 11357 - 12340 (+)
Gene ID: Rep_3563_c_38_11
Type: pfam
Location: 12351 - 13829 (+)
Type: pfam
Location: 12351 - 13829 (+)
Gene ID: Rep_3563_c_38_12
Type: TC
Location: 13840 - 15297 (+)
Type: TC
Location: 13840 - 15297 (+)
Gene ID: Rep_3563_c_38_13
Type: CAZyme
Location: 15294 - 16235 (+)
Type: CAZyme
Location: 15294 - 16235 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA737
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.