Cluster: Rep_3563_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3563
- CGC Family ID: CGCFAM_00198
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3563_c_34 | Rep_3563_c_34_24 | 28854 | 30308 | + | 2.A.50.2.1 |
| NULL(UNKNOWN) | Rep_3563_c_34 | Rep_3563_c_34_25 | 30323 | 31378 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | Rep_3563_c_34 | Rep_3563_c_34_26 | 31577 | 31729 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3563_c_34 | Rep_3563_c_34_27 | 32015 | 34144 | + | GH36 |
| pfam | Rep_3563_c_34 | Rep_3563_c_34_28 | 34298 | 35182 | - | MMR_HSR1 | RsgA_GTPase | RsgA_N |
| TC | Rep_3563_c_34 | Rep_3563_c_34_29 | 35189 | 37213 | - | 9.B.106.2.2 |
Gene ID: Rep_3563_c_34_24
Type: TC
Location: 28854 - 30308 (+)
Type: TC
Location: 28854 - 30308 (+)
Gene ID: Rep_3563_c_34_25
Type:
Location: 30323 - 31378 (+)
Type:
Location: 30323 - 31378 (+)
Gene ID: Rep_3563_c_34_26
Type:
Location: 31577 - 31729 (-)
Type:
Location: 31577 - 31729 (-)
Gene ID: Rep_3563_c_34_27
Type: CAZyme
Location: 32015 - 34144 (+)
Type: CAZyme
Location: 32015 - 34144 (+)
Gene ID: Rep_3563_c_34_28
Type: pfam
Location: 34298 - 35182 (-)
Type: pfam
Location: 34298 - 35182 (-)
Gene ID: Rep_3563_c_34_29
Type: TC
Location: 35189 - 37213 (-)
Type: TC
Location: 35189 - 37213 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA737
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.