Cluster: Rep_3563_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3563
- CGC Family ID: CGCFAM_08196
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3563_c_23 | Rep_3563_c_23_46 | 45254 | 46612 | + | 1.A.26.1.2 |
| TF | Rep_3563_c_23 | Rep_3563_c_23_47 | 46615 | 47460 | - | HTH_AraC |
| pfam | Rep_3563_c_23 | Rep_3563_c_23_48 | 47571 | 49013 | + | Arabinose_Iso_C |
| CAZyme | Rep_3563_c_23 | Rep_3563_c_23_49 | 49041 | 52169 | + | GH106 |
Gene ID: Rep_3563_c_23_46
Type: TC
Location: 45254 - 46612 (+)
Type: TC
Location: 45254 - 46612 (+)
Gene ID: Rep_3563_c_23_47
Type: TF
Location: 46615 - 47460 (-)
Type: TF
Location: 46615 - 47460 (-)
Gene ID: Rep_3563_c_23_48
Type: pfam
Location: 47571 - 49013 (+)
Type: pfam
Location: 47571 - 49013 (+)
Gene ID: Rep_3563_c_23_49
Type: CAZyme
Location: 49041 - 52169 (+)
Type: CAZyme
Location: 49041 - 52169 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UBA737
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.