Cluster: Rep_3562_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3562
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3562_c_1 | Rep_3562_c_1_111 | 127966 | 129282 | + | GH20 |
| pfam | Rep_3562_c_1 | Rep_3562_c_1_112 | 129266 | 130531 | + | DUF4434 |
| TC | Rep_3562_c_1 | Rep_3562_c_1_113 | 130574 | 131965 | - | 2.A.40.1.4 |
| TC | Rep_3562_c_1 | Rep_3562_c_1_114 | 132346 | 134031 | + | 3.A.1.117.2 |
| pfam | Rep_3562_c_1 | Rep_3562_c_1_115 | 134031 | 134807 | + | Wzz |
| TC | Rep_3562_c_1 | Rep_3562_c_1_116 | 134807 | 135616 | + | 8.A.3.2.1 |
Gene ID: Rep_3562_c_1_111
Type: CAZyme
Location: 127966 - 129282 (+)
Type: CAZyme
Location: 127966 - 129282 (+)
Gene ID: Rep_3562_c_1_112
Type: pfam
Location: 129266 - 130531 (+)
Type: pfam
Location: 129266 - 130531 (+)
Gene ID: Rep_3562_c_1_113
Type: TC
Location: 130574 - 131965 (-)
Type: TC
Location: 130574 - 131965 (-)
Gene ID: Rep_3562_c_1_114
Type: TC
Location: 132346 - 134031 (+)
Type: TC
Location: 132346 - 134031 (+)
Gene ID: Rep_3562_c_1_115
Type: pfam
Location: 134031 - 134807 (+)
Type: pfam
Location: 134031 - 134807 (+)
Gene ID: Rep_3562_c_1_116
Type: TC
Location: 134807 - 135616 (+)
Type: TC
Location: 134807 - 135616 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1279
Species
UMGS1279 sp902490735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.