Cluster: Rep_3562_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3562
- CGC Family ID: CGCFAM_00691
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3562_c_0 | Rep_3562_c_0_190 | 213275 | 214423 | - | 3.A.1.1.26 |
| STP | Rep_3562_c_0 | Rep_3562_c_0_191 | 215100 | 216398 | + | SBP_bac_1 |
| TC | Rep_3562_c_0 | Rep_3562_c_0_192 | 216490 | 217392 | + | 3.A.1.1.20 |
| TC | Rep_3562_c_0 | Rep_3562_c_0_193 | 217411 | 218253 | + | 3.A.1.1.36 |
| TF | Rep_3562_c_0 | Rep_3562_c_0_194 | 218436 | 219299 | + | HTH_AraC | HTH_AraC |
| CAZyme | Rep_3562_c_0 | Rep_3562_c_0_195 | 219320 | 221512 | + | GH36 |
Gene ID: Rep_3562_c_0_190
Type: TC
Location: 213275 - 214423 (-)
Type: TC
Location: 213275 - 214423 (-)
Gene ID: Rep_3562_c_0_191
Type: STP
Location: 215100 - 216398 (+)
Type: STP
Location: 215100 - 216398 (+)
Gene ID: Rep_3562_c_0_192
Type: TC
Location: 216490 - 217392 (+)
Type: TC
Location: 216490 - 217392 (+)
Gene ID: Rep_3562_c_0_193
Type: TC
Location: 217411 - 218253 (+)
Type: TC
Location: 217411 - 218253 (+)
Gene ID: Rep_3562_c_0_194
Type: TF
Location: 218436 - 219299 (+)
Type: TF
Location: 218436 - 219299 (+)
Gene ID: Rep_3562_c_0_195
Type: CAZyme
Location: 219320 - 221512 (+)
Type: CAZyme
Location: 219320 - 221512 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1279
Species
UMGS1279 sp902490735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.