Cluster: Rep_3562_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3562
- CGC Family ID: CGCFAM_07353
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3562_c_8 | Rep_3562_c_8_15 | 21702 | 23321 | - | GH20 |
| CAZyme | Rep_3562_c_8 | Rep_3562_c_8_16 | 23332 | 24948 | - | GH20 |
| STP | Rep_3562_c_8 | Rep_3562_c_8_17 | 25007 | 26557 | - | HD |
| TC | Rep_3562_c_8 | Rep_3562_c_8_18 | 26830 | 27966 | + | 3.B.1.1.5 |
Gene ID: Rep_3562_c_8_15
Type: CAZyme
Location: 21702 - 23321 (-)
Type: CAZyme
Location: 21702 - 23321 (-)
Gene ID: Rep_3562_c_8_16
Type: CAZyme
Location: 23332 - 24948 (-)
Type: CAZyme
Location: 23332 - 24948 (-)
Gene ID: Rep_3562_c_8_17
Type: STP
Location: 25007 - 26557 (-)
Type: STP
Location: 25007 - 26557 (-)
Gene ID: Rep_3562_c_8_18
Type: TC
Location: 26830 - 27966 (+)
Type: TC
Location: 26830 - 27966 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1279
Species
UMGS1279 sp902490735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.