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Cluster: Rep_3562_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3562_c_6 Rep_3562_c_6_6 5411 6580 + GT4
TC Rep_3562_c_6 Rep_3562_c_6_7 6588 7580 - 9.A.11.1.1
TC Rep_3562_c_6 Rep_3562_c_6_8 7584 8033 - 9.A.11.1.1
TC Rep_3562_c_6 Rep_3562_c_6_9 8112 8780 + 3.A.1.122.2
Gene ID: Rep_3562_c_6_6
Type: CAZyme
Location: 5411 - 6580 (+)
Gene ID: Rep_3562_c_6_7
Type: TC
Location: 6588 - 7580 (-)
Gene ID: Rep_3562_c_6_8
Type: TC
Location: 7584 - 8033 (-)
Gene ID: Rep_3562_c_6_9
Type: TC
Location: 8112 - 8780 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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