Cluster: Rep_3562_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3562
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3562_c_3 | Rep_3562_c_3_70 | 68645 | 69502 | - | 2.A.115.1.1 |
| pfam | Rep_3562_c_3 | Rep_3562_c_3_71 | 69626 | 70729 | + | Acyl_transf_3 |
| CAZyme | Rep_3562_c_3 | Rep_3562_c_3_72 | 70810 | 72411 | - | GH20 |
| STP | Rep_3562_c_3 | Rep_3562_c_3_73 | 72553 | 73068 | - | Nitroreductase | Nitroreductase |
| pfam | Rep_3562_c_3 | Rep_3562_c_3_74 | 73086 | 74207 | - | LtrA |
| TC | Rep_3562_c_3 | Rep_3562_c_3_75 | 74374 | 75870 | - | 2.A.35.2.1 |
Gene ID: Rep_3562_c_3_70
Type: TC
Location: 68645 - 69502 (-)
Type: TC
Location: 68645 - 69502 (-)
Gene ID: Rep_3562_c_3_71
Type: pfam
Location: 69626 - 70729 (+)
Type: pfam
Location: 69626 - 70729 (+)
Gene ID: Rep_3562_c_3_72
Type: CAZyme
Location: 70810 - 72411 (-)
Type: CAZyme
Location: 70810 - 72411 (-)
Gene ID: Rep_3562_c_3_73
Type: STP
Location: 72553 - 73068 (-)
Type: STP
Location: 72553 - 73068 (-)
Gene ID: Rep_3562_c_3_74
Type: pfam
Location: 73086 - 74207 (-)
Type: pfam
Location: 73086 - 74207 (-)
Gene ID: Rep_3562_c_3_75
Type: TC
Location: 74374 - 75870 (-)
Type: TC
Location: 74374 - 75870 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1279
Species
UMGS1279 sp902490735
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.