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Cluster: Rep_3557_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_3557_c_1 Rep_3557_c_1_40 30255 34067 + GH36
CAZyme Rep_3557_c_1 Rep_3557_c_1_41 34601 36844 + GT4
pfam Rep_3557_c_1 Rep_3557_c_1_42 36948 38141 + Ala_racemase_C | Ala_racemase_N
CAZyme Rep_3557_c_1 Rep_3557_c_1_43 38251 40911 + GH2
pfam Rep_3557_c_1 Rep_3557_c_1_44 40962 41462 + SpoU_methylase
TC Rep_3557_c_1 Rep_3557_c_1_45 41589 42455 + 2.A.115.1.1
Gene ID: Rep_3557_c_1_40
Type: CAZyme
Location: 30255 - 34067 (+)
Gene ID: Rep_3557_c_1_41
Type: CAZyme
Location: 34601 - 36844 (+)
Gene ID: Rep_3557_c_1_42
Type: pfam
Location: 36948 - 38141 (+)
Gene ID: Rep_3557_c_1_43
Type: CAZyme
Location: 38251 - 40911 (+)
Gene ID: Rep_3557_c_1_44
Type: pfam
Location: 40962 - 41462 (+)
Gene ID: Rep_3557_c_1_45
Type: TC
Location: 41589 - 42455 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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