Cluster: Rep_3557_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_3557
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3557_c_0 | Rep_3557_c_0_19 | 22337 | 26044 | + | GH36 |
| pfam | Rep_3557_c_0 | Rep_3557_c_0_20 | 26256 | 27713 | + | FGGY_N | FGGY_C |
| CAZyme | Rep_3557_c_0 | Rep_3557_c_0_21 | 27828 | 29183 | + | GH43_26 |
| CAZyme | Rep_3557_c_0 | Rep_3557_c_0_22 | 29282 | 31294 | + | GH43_26 |
| pfam | Rep_3557_c_0 | Rep_3557_c_0_23 | 31513 | 32166 | - | ABC2_membrane_5 |
| TC | Rep_3557_c_0 | Rep_3557_c_0_24 | 32163 | 33005 | - | 3.A.1.149.1 |
Gene ID: Rep_3557_c_0_19
Type: CAZyme
Location: 22337 - 26044 (+)
Type: CAZyme
Location: 22337 - 26044 (+)
Gene ID: Rep_3557_c_0_20
Type: pfam
Location: 26256 - 27713 (+)
Type: pfam
Location: 26256 - 27713 (+)
Gene ID: Rep_3557_c_0_21
Type: CAZyme
Location: 27828 - 29183 (+)
Type: CAZyme
Location: 27828 - 29183 (+)
Gene ID: Rep_3557_c_0_22
Type: CAZyme
Location: 29282 - 31294 (+)
Type: CAZyme
Location: 29282 - 31294 (+)
Gene ID: Rep_3557_c_0_23
Type: pfam
Location: 31513 - 32166 (-)
Type: pfam
Location: 31513 - 32166 (-)
Gene ID: Rep_3557_c_0_24
Type: TC
Location: 32163 - 33005 (-)
Type: TC
Location: 32163 - 33005 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1484
Species
UMGS1484 sp934486455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.