Cluster: Rep_3557_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3557
- CGC Family ID: CGCFAM_00196
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3557_c_17 | Rep_3557_c_17_25 | 27992 | 28858 | - | 2.A.115.1.5 |
| NULL(UNKNOWN) | Rep_3557_c_17 | Rep_3557_c_17_26 | 29070 | 30941 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_3557_c_17 | Rep_3557_c_17_27 | 31306 | 33285 | - | 3.A.1.135.5 |
| TC | Rep_3557_c_17 | Rep_3557_c_17_28 | 33287 | 35020 | - | 3.A.1.135.5 |
| TF | Rep_3557_c_17 | Rep_3557_c_17_29 | 35017 | 35454 | - | MarR |
| CAZyme | Rep_3557_c_17 | Rep_3557_c_17_30 | 35860 | 37677 | + | CE20 |
Gene ID: Rep_3557_c_17_25
Type: TC
Location: 27992 - 28858 (-)
Type: TC
Location: 27992 - 28858 (-)
Gene ID: Rep_3557_c_17_26
Type:
Location: 29070 - 30941 (-)
Type:
Location: 29070 - 30941 (-)
Gene ID: Rep_3557_c_17_27
Type: TC
Location: 31306 - 33285 (-)
Type: TC
Location: 31306 - 33285 (-)
Gene ID: Rep_3557_c_17_28
Type: TC
Location: 33287 - 35020 (-)
Type: TC
Location: 33287 - 35020 (-)
Gene ID: Rep_3557_c_17_29
Type: TF
Location: 35017 - 35454 (-)
Type: TF
Location: 35017 - 35454 (-)
Gene ID: Rep_3557_c_17_30
Type: CAZyme
Location: 35860 - 37677 (+)
Type: CAZyme
Location: 35860 - 37677 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
UMGS1484
Species
UMGS1484 sp934486455
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.