Cluster: Rep_3554_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3554
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3554_c_24 | Rep_3554_c_24_4 | 4881 | 7118 | + | GT51 |
| pfam | Rep_3554_c_24 | Rep_3554_c_24_5 | 7183 | 8289 | + | UPF0020 | THUMP | RlmL_1st |
| TC | Rep_3554_c_24 | Rep_3554_c_24_6 | 8302 | 9186 | + | 2.A.115.1.5 |
Gene ID: Rep_3554_c_24_4
Type: CAZyme
Location: 4881 - 7118 (+)
Type: CAZyme
Location: 4881 - 7118 (+)
Gene ID: Rep_3554_c_24_5
Type: pfam
Location: 7183 - 8289 (+)
Type: pfam
Location: 7183 - 8289 (+)
Gene ID: Rep_3554_c_24_6
Type: TC
Location: 8302 - 9186 (+)
Type: TC
Location: 8302 - 9186 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UMGS1601
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.