Cluster: Rep_3554_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3554
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3554_c_21 | Rep_3554_c_21_18 | 28116 | 29051 | - | GT2 |
| NULL(UNKNOWN) | Rep_3554_c_21 | Rep_3554_c_21_19 | 29077 | 29655 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_3554_c_21 | Rep_3554_c_21_20 | 29794 | 33153 | + | YfhO | YfhO |
| TC | Rep_3554_c_21 | Rep_3554_c_21_21 | 33288 | 35939 | + | 3.A.3.2.21 |
Gene ID: Rep_3554_c_21_18
Type: CAZyme
Location: 28116 - 29051 (-)
Type: CAZyme
Location: 28116 - 29051 (-)
Gene ID: Rep_3554_c_21_19
Type:
Location: 29077 - 29655 (-)
Type:
Location: 29077 - 29655 (-)
Gene ID: Rep_3554_c_21_20
Type: pfam
Location: 29794 - 33153 (+)
Type: pfam
Location: 29794 - 33153 (+)
Gene ID: Rep_3554_c_21_21
Type: TC
Location: 33288 - 35939 (+)
Type: TC
Location: 33288 - 35939 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UMGS1601
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.