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Cluster: Rep_3554_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_3554_c_102 Rep_3554_c_102_6 3364 4710 + 3.B.1.1.5
TC Rep_3554_c_102 Rep_3554_c_102_7 4735 5121 + 3.B.1.1.2
TC Rep_3554_c_102 Rep_3554_c_102_8 5143 6540 + 3.B.1.1.6
STP Rep_3554_c_102 Rep_3554_c_102_9 6782 8206 - SBP_bac_1
TC Rep_3554_c_102 Rep_3554_c_102_10 8814 10196 + 2.A.66.1.32
pfam Rep_3554_c_102 Rep_3554_c_102_11 10255 10713 - G3P_acyltransf
CAZyme Rep_3554_c_102 Rep_3554_c_102_12 10913 12031 - GT28
CAZyme Rep_3554_c_102 Rep_3554_c_102_13 12295 13245 + GT2
STP Rep_3554_c_102 Rep_3554_c_102_14 13261 14235 + NUDIX
TC Rep_3554_c_102 Rep_3554_c_102_15 14273 16588 + 3.A.3.23.2
Gene ID: Rep_3554_c_102_6
Type: TC
Location: 3364 - 4710 (+)
Gene ID: Rep_3554_c_102_7
Type: TC
Location: 4735 - 5121 (+)
Gene ID: Rep_3554_c_102_8
Type: TC
Location: 5143 - 6540 (+)
Gene ID: Rep_3554_c_102_9
Type: STP
Location: 6782 - 8206 (-)
Gene ID: Rep_3554_c_102_10
Type: TC
Location: 8814 - 10196 (+)
Gene ID: Rep_3554_c_102_11
Type: pfam
Location: 10255 - 10713 (-)
Gene ID: Rep_3554_c_102_12
Type: CAZyme
Location: 10913 - 12031 (-)
Gene ID: Rep_3554_c_102_13
Type: CAZyme
Location: 12295 - 13245 (+)
Gene ID: Rep_3554_c_102_14
Type: STP
Location: 13261 - 14235 (+)
Gene ID: Rep_3554_c_102_15
Type: TC
Location: 14273 - 16588 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Ruminococcaceae
→
Genus
UMGS1601
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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