Cluster: Rep_3554_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_3554
- CGC Family ID: CGCFAM_03609
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3554_c_87 | Rep_3554_c_87_12 | 9995 | 11827 | - | GT2 |
| TC | Rep_3554_c_87 | Rep_3554_c_87_13 | 11918 | 12763 | - | 3.A.1.103.1 |
| TC | Rep_3554_c_87 | Rep_3554_c_87_14 | 12782 | 13639 | - | 3.A.1.103.4 |
| CAZyme | Rep_3554_c_87 | Rep_3554_c_87_15 | 13678 | 14718 | - | GT2 |
| pfam | Rep_3554_c_87 | Rep_3554_c_87_16 | 14715 | 15521 | - | Glycos_transf_2 |
| TC | Rep_3554_c_87 | Rep_3554_c_87_17 | 15770 | 17140 | + | 2.A.25.1.3 |
| CAZyme | Rep_3554_c_87 | Rep_3554_c_87_18 | 17163 | 19481 | - | GH74 | GH74 |
Gene ID: Rep_3554_c_87_12
Type: CAZyme
Location: 9995 - 11827 (-)
Type: CAZyme
Location: 9995 - 11827 (-)
Gene ID: Rep_3554_c_87_13
Type: TC
Location: 11918 - 12763 (-)
Type: TC
Location: 11918 - 12763 (-)
Gene ID: Rep_3554_c_87_14
Type: TC
Location: 12782 - 13639 (-)
Type: TC
Location: 12782 - 13639 (-)
Gene ID: Rep_3554_c_87_15
Type: CAZyme
Location: 13678 - 14718 (-)
Type: CAZyme
Location: 13678 - 14718 (-)
Gene ID: Rep_3554_c_87_16
Type: pfam
Location: 14715 - 15521 (-)
Type: pfam
Location: 14715 - 15521 (-)
Gene ID: Rep_3554_c_87_17
Type: TC
Location: 15770 - 17140 (+)
Type: TC
Location: 15770 - 17140 (+)
Gene ID: Rep_3554_c_87_18
Type: CAZyme
Location: 17163 - 19481 (-)
Type: CAZyme
Location: 17163 - 19481 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UMGS1601
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.