Cluster: Rep_3554_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3554
- CGC Family ID: CGCFAM_01571
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3554_c_74 | Rep_3554_c_74_1 | 99 | 2051 | - | GH13_14 |
| pfam | Rep_3554_c_74 | Rep_3554_c_74_2 | 2066 | 2914 | - | PS_Dcarbxylase |
| pfam | Rep_3554_c_74 | Rep_3554_c_74_3 | 2914 | 3555 | - | CDP-OH_P_transf |
| TC | Rep_3554_c_74 | Rep_3554_c_74_4 | 3572 | 4537 | - | 9.B.146.1.6 |
| CAZyme | Rep_3554_c_74 | Rep_3554_c_74_5 | 4609 | 5244 | - | CE4 |
Gene ID: Rep_3554_c_74_1
Type: CAZyme
Location: 99 - 2051 (-)
Type: CAZyme
Location: 99 - 2051 (-)
Gene ID: Rep_3554_c_74_2
Type: pfam
Location: 2066 - 2914 (-)
Type: pfam
Location: 2066 - 2914 (-)
Gene ID: Rep_3554_c_74_3
Type: pfam
Location: 2914 - 3555 (-)
Type: pfam
Location: 2914 - 3555 (-)
Gene ID: Rep_3554_c_74_4
Type: TC
Location: 3572 - 4537 (-)
Type: TC
Location: 3572 - 4537 (-)
Gene ID: Rep_3554_c_74_5
Type: CAZyme
Location: 4609 - 5244 (-)
Type: CAZyme
Location: 4609 - 5244 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UMGS1601
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.