Cluster: Rep_3554_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3554
- CGC Family ID: CGCFAM_06350
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3554_c_21 | Rep_3554_c_21_10 | 10156 | 11721 | + | 3.A.1.32.2 |
| pfam | Rep_3554_c_21 | Rep_3554_c_21_11 | 11718 | 12311 | + | ECF-ribofla_trS |
| CAZyme | Rep_3554_c_21 | Rep_3554_c_21_12 | 12620 | 16813 | + | GH5_4 |
Gene ID: Rep_3554_c_21_10
Type: TC
Location: 10156 - 11721 (+)
Type: TC
Location: 10156 - 11721 (+)
Gene ID: Rep_3554_c_21_11
Type: pfam
Location: 11718 - 12311 (+)
Type: pfam
Location: 11718 - 12311 (+)
Gene ID: Rep_3554_c_21_12
Type: CAZyme
Location: 12620 - 16813 (+)
Type: CAZyme
Location: 12620 - 16813 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
UMGS1601
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.