Cluster: Rep_3552_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3552
- CGC Family ID: CGCFAM_02681
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3552_c_1 | Rep_3552_c_1_276 | 290777 | 291691 | - | 3.A.11.2.2 |
| pfam | Rep_3552_c_1 | Rep_3552_c_1_277 | 291666 | 293525 | - | Radical_SAM | Radical_SAM_N | DUF3362 |
| TC | Rep_3552_c_1 | Rep_3552_c_1_278 | 293529 | 296144 | - | 3.A.12.1.1 |
| pfam | Rep_3552_c_1 | Rep_3552_c_1_279 | 296308 | 297162 | + | Aldose_epim |
| pfam | Rep_3552_c_1 | Rep_3552_c_1_280 | 297236 | 298153 | - | LRR_5 | LRR_5 |
| CAZyme | Rep_3552_c_1 | Rep_3552_c_1_281 | 298165 | 299838 | - | GH13_31 |
Gene ID: Rep_3552_c_1_276
Type: TC
Location: 290777 - 291691 (-)
Type: TC
Location: 290777 - 291691 (-)
Gene ID: Rep_3552_c_1_277
Type: pfam
Location: 291666 - 293525 (-)
Type: pfam
Location: 291666 - 293525 (-)
Gene ID: Rep_3552_c_1_278
Type: TC
Location: 293529 - 296144 (-)
Type: TC
Location: 293529 - 296144 (-)
Gene ID: Rep_3552_c_1_279
Type: pfam
Location: 296308 - 297162 (+)
Type: pfam
Location: 296308 - 297162 (+)
Gene ID: Rep_3552_c_1_280
Type: pfam
Location: 297236 - 298153 (-)
Type: pfam
Location: 297236 - 298153 (-)
Gene ID: Rep_3552_c_1_281
Type: CAZyme
Location: 298165 - 299838 (-)
Type: CAZyme
Location: 298165 - 299838 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-488
Species
CAG-488 sp000434915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.