Cluster: Rep_3552_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3552
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3552_c_1 | Rep_3552_c_1_231 | 244707 | 246212 | - | 2.A.2.3.1 |
| pfam | Rep_3552_c_1 | Rep_3552_c_1_232 | 246405 | 247031 | - | Spore_II_R |
| pfam | Rep_3552_c_1 | Rep_3552_c_1_233 | 247086 | 248081 | - | WYL |
| CAZyme | Rep_3552_c_1 | Rep_3552_c_1_234 | 248092 | 249849 | - | GH2 |
| NULL(UNKNOWN) | Rep_3552_c_1 | Rep_3552_c_1_235 | 249846 | 250190 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3552_c_1 | Rep_3552_c_1_236 | 250183 | 251184 | - | GT2 |
Gene ID: Rep_3552_c_1_231
Type: TC
Location: 244707 - 246212 (-)
Type: TC
Location: 244707 - 246212 (-)
Gene ID: Rep_3552_c_1_232
Type: pfam
Location: 246405 - 247031 (-)
Type: pfam
Location: 246405 - 247031 (-)
Gene ID: Rep_3552_c_1_233
Type: pfam
Location: 247086 - 248081 (-)
Type: pfam
Location: 247086 - 248081 (-)
Gene ID: Rep_3552_c_1_234
Type: CAZyme
Location: 248092 - 249849 (-)
Type: CAZyme
Location: 248092 - 249849 (-)
Gene ID: Rep_3552_c_1_235
Type:
Location: 249846 - 250190 (-)
Type:
Location: 249846 - 250190 (-)
Gene ID: Rep_3552_c_1_236
Type: CAZyme
Location: 250183 - 251184 (-)
Type: CAZyme
Location: 250183 - 251184 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-488
Species
CAG-488 sp000434915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.