dbCAN HGM

Cluster: Rep_3552_CGC33

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
TC	Rep_3552_c_1	Rep_3552_c_1_1793	2037781	2039406	-	4.C.1.1.4
pfam	Rep_3552_c_1	Rep_3552_c_1_1794	2039577	2039924	-	PemK_toxin
CAZyme	Rep_3552_c_1	Rep_3552_c_1_1795	2040069	2041904	-	GH110
pfam	Rep_3552_c_1	Rep_3552_c_1_1796	2041914	2042153	-	4HBT
NULL(UNKNOWN)	Rep_3552_c_1	Rep_3552_c_1_1797	2042346	2042690	-	NULL(UNKNOWN) [View Structural Homologs]
CAZyme	Rep_3552_c_1	Rep_3552_c_1_1798	2042666	2043430	-	GH179
pfam	Rep_3552_c_1	Rep_3552_c_1_1799	2043587	2044246	+	Hydrolase \| HAD_2
CAZyme	Rep_3552_c_1	Rep_3552_c_1_1800	2044297	2047377	-	GH38

Gene ID: Rep_3552_c_1_1793
Type: TC
Location: 2037781 - 2039406 (-)

Gene ID: Rep_3552_c_1_1794
Type: pfam
Location: 2039577 - 2039924 (-)

Gene ID: Rep_3552_c_1_1795
Type: CAZyme
Location: 2040069 - 2041904 (-)

Gene ID: Rep_3552_c_1_1796
Type: pfam
Location: 2041914 - 2042153 (-)

Gene ID: Rep_3552_c_1_1797
Type:
Location: 2042346 - 2042690 (-)

Gene ID: Rep_3552_c_1_1798
Type: CAZyme
Location: 2042666 - 2043430 (-)

Gene ID: Rep_3552_c_1_1799
Type: pfam
Location: 2043587 - 2044246 (+)

Gene ID: Rep_3552_c_1_1800
Type: CAZyme
Location: 2044297 - 2047377 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.