Cluster: Rep_3552_CGC32
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: Rep_3552
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3552_c_1 | Rep_3552_c_1_1778 | 2012110 | 2012796 | + | 9.B.18.1.2 |
| CAZyme | Rep_3552_c_1 | Rep_3552_c_1_1779 | 2012797 | 2013933 | + | GT4 |
| CAZyme | Rep_3552_c_1 | Rep_3552_c_1_1780 | 2013936 | 2015123 | + | GT4 |
| CAZyme | Rep_3552_c_1 | Rep_3552_c_1_1781 | 2015125 | 2016306 | + | GT4 |
| pfam | Rep_3552_c_1 | Rep_3552_c_1_1782 | 2016312 | 2017412 | + | Radical_SAM | SPASM |
| pfam | Rep_3552_c_1 | Rep_3552_c_1_1783 | 2017420 | 2018433 | + | Glycos_transf_1 | Glyco_trans_1_4 |
| CAZyme | Rep_3552_c_1 | Rep_3552_c_1_1784 | 2018454 | 2019470 | + | GT2 |
Gene ID: Rep_3552_c_1_1778
Type: TC
Location: 2012110 - 2012796 (+)
Type: TC
Location: 2012110 - 2012796 (+)
Gene ID: Rep_3552_c_1_1779
Type: CAZyme
Location: 2012797 - 2013933 (+)
Type: CAZyme
Location: 2012797 - 2013933 (+)
Gene ID: Rep_3552_c_1_1780
Type: CAZyme
Location: 2013936 - 2015123 (+)
Type: CAZyme
Location: 2013936 - 2015123 (+)
Gene ID: Rep_3552_c_1_1781
Type: CAZyme
Location: 2015125 - 2016306 (+)
Type: CAZyme
Location: 2015125 - 2016306 (+)
Gene ID: Rep_3552_c_1_1782
Type: pfam
Location: 2016312 - 2017412 (+)
Type: pfam
Location: 2016312 - 2017412 (+)
Gene ID: Rep_3552_c_1_1783
Type: pfam
Location: 2017420 - 2018433 (+)
Type: pfam
Location: 2017420 - 2018433 (+)
Gene ID: Rep_3552_c_1_1784
Type: CAZyme
Location: 2018454 - 2019470 (+)
Type: CAZyme
Location: 2018454 - 2019470 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-488
Species
CAG-488 sp000434915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.