Cluster: Rep_3552_CGC30
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3552
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3552_c_1 | Rep_3552_c_1_1636 | 1821353 | 1823764 | - | GH3 |
| pfam | Rep_3552_c_1 | Rep_3552_c_1_1637 | 1823761 | 1824333 | - | 5-FTHF_cyc-lig |
| TF | Rep_3552_c_1 | Rep_3552_c_1_1638 | 1824495 | 1824689 | + | HTH_3 |
| TC | Rep_3552_c_1 | Rep_3552_c_1_1639 | 1824661 | 1825674 | - | 9.B.97.6.1 |
Gene ID: Rep_3552_c_1_1636
Type: CAZyme
Location: 1821353 - 1823764 (-)
Type: CAZyme
Location: 1821353 - 1823764 (-)
Gene ID: Rep_3552_c_1_1637
Type: pfam
Location: 1823761 - 1824333 (-)
Type: pfam
Location: 1823761 - 1824333 (-)
Gene ID: Rep_3552_c_1_1638
Type: TF
Location: 1824495 - 1824689 (+)
Type: TF
Location: 1824495 - 1824689 (+)
Gene ID: Rep_3552_c_1_1639
Type: TC
Location: 1824661 - 1825674 (-)
Type: TC
Location: 1824661 - 1825674 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-488
Species
CAG-488 sp000434915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.