Cluster: Rep_3552_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3552
- CGC Family ID: CGCFAM_05121
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3552_c_1 | Rep_3552_c_1_161 | 177825 | 178910 | - | GT4 |
| TC | Rep_3552_c_1 | Rep_3552_c_1_162 | 178911 | 179426 | - | 2.A.88.9.2 |
| pfam | Rep_3552_c_1 | Rep_3552_c_1_163 | 179692 | 180279 | - | Hydrolase_6 |
| TF | Rep_3552_c_1 | Rep_3552_c_1_164 | 180475 | 180873 | + | HTH_3 |
| CAZyme | Rep_3552_c_1 | Rep_3552_c_1_165 | 180924 | 181826 | - | GH25 |
Gene ID: Rep_3552_c_1_161
Type: CAZyme
Location: 177825 - 178910 (-)
Type: CAZyme
Location: 177825 - 178910 (-)
Gene ID: Rep_3552_c_1_162
Type: TC
Location: 178911 - 179426 (-)
Type: TC
Location: 178911 - 179426 (-)
Gene ID: Rep_3552_c_1_163
Type: pfam
Location: 179692 - 180279 (-)
Type: pfam
Location: 179692 - 180279 (-)
Gene ID: Rep_3552_c_1_164
Type: TF
Location: 180475 - 180873 (+)
Type: TF
Location: 180475 - 180873 (+)
Gene ID: Rep_3552_c_1_165
Type: CAZyme
Location: 180924 - 181826 (-)
Type: CAZyme
Location: 180924 - 181826 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-488
Species
CAG-488 sp000434915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.