Cluster: Rep_3552_CGC29
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3552
- CGC Family ID: CGCFAM_01727
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3552_c_1 | Rep_3552_c_1_1404 | 1584136 | 1585434 | + | GT4 |
| pfam | Rep_3552_c_1 | Rep_3552_c_1_1405 | 1585448 | 1586695 | + | Wzy_C |
| TC | Rep_3552_c_1 | Rep_3552_c_1_1406 | 1586713 | 1588167 | + | 8.A.3.2.2 |
| NULL(UNKNOWN) | Rep_3552_c_1 | Rep_3552_c_1_1407 | 1588225 | 1588836 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_3552_c_1 | Rep_3552_c_1_1408 | 1588836 | 1590173 | + | PG_binding_1 | PG_binding_1 | PG_binding_1 | SpoIID |
| TC | Rep_3552_c_1 | Rep_3552_c_1_1409 | 1590234 | 1591655 | + | 9.A.11.1.1 |
Gene ID: Rep_3552_c_1_1404
Type: CAZyme
Location: 1584136 - 1585434 (+)
Type: CAZyme
Location: 1584136 - 1585434 (+)
Gene ID: Rep_3552_c_1_1405
Type: pfam
Location: 1585448 - 1586695 (+)
Type: pfam
Location: 1585448 - 1586695 (+)
Gene ID: Rep_3552_c_1_1406
Type: TC
Location: 1586713 - 1588167 (+)
Type: TC
Location: 1586713 - 1588167 (+)
Gene ID: Rep_3552_c_1_1407
Type:
Location: 1588225 - 1588836 (+)
Type:
Location: 1588225 - 1588836 (+)
Gene ID: Rep_3552_c_1_1408
Type: pfam
Location: 1588836 - 1590173 (+)
Type: pfam
Location: 1588836 - 1590173 (+)
Gene ID: Rep_3552_c_1_1409
Type: TC
Location: 1590234 - 1591655 (+)
Type: TC
Location: 1590234 - 1591655 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-488
Species
CAG-488 sp000434915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.