Cluster: Rep_3552_CGC26
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3552
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_3552_c_1 | Rep_3552_c_1_1312 | 1474143 | 1475612 | + | 2.A.103.1.3 |
| pfam | Rep_3552_c_1 | Rep_3552_c_1_1313 | 1475613 | 1476983 | + | Transpeptidase |
| NULL(UNKNOWN) | Rep_3552_c_1 | Rep_3552_c_1_1314 | 1477181 | 1478005 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_3552_c_1 | Rep_3552_c_1_1315 | 1478156 | 1480231 | + | GH89 |
| CAZyme | Rep_3552_c_1 | Rep_3552_c_1_1316 | 1480243 | 1481526 | + | GH125 |
Gene ID: Rep_3552_c_1_1312
Type: TC
Location: 1474143 - 1475612 (+)
Type: TC
Location: 1474143 - 1475612 (+)
Gene ID: Rep_3552_c_1_1313
Type: pfam
Location: 1475613 - 1476983 (+)
Type: pfam
Location: 1475613 - 1476983 (+)
Gene ID: Rep_3552_c_1_1314
Type:
Location: 1477181 - 1478005 (+)
Type:
Location: 1477181 - 1478005 (+)
Gene ID: Rep_3552_c_1_1315
Type: CAZyme
Location: 1478156 - 1480231 (+)
Type: CAZyme
Location: 1478156 - 1480231 (+)
Gene ID: Rep_3552_c_1_1316
Type: CAZyme
Location: 1480243 - 1481526 (+)
Type: CAZyme
Location: 1480243 - 1481526 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-488
Species
CAG-488 sp000434915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.