Cluster: Rep_3552_CGC25
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3552
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3552_c_1 | Rep_3552_c_1_1290 | 1454503 | 1455195 | - | GT32 |
| pfam | Rep_3552_c_1 | Rep_3552_c_1_1291 | 1455522 | 1456397 | + | RNase_T |
| STP | Rep_3552_c_1 | Rep_3552_c_1_1292 | 1456628 | 1457158 | + | Pribosyltran |
| TC | Rep_3552_c_1 | Rep_3552_c_1_1293 | 1457212 | 1458597 | + | 2.A.40.1.2 |
Gene ID: Rep_3552_c_1_1290
Type: CAZyme
Location: 1454503 - 1455195 (-)
Type: CAZyme
Location: 1454503 - 1455195 (-)
Gene ID: Rep_3552_c_1_1291
Type: pfam
Location: 1455522 - 1456397 (+)
Type: pfam
Location: 1455522 - 1456397 (+)
Gene ID: Rep_3552_c_1_1292
Type: STP
Location: 1456628 - 1457158 (+)
Type: STP
Location: 1456628 - 1457158 (+)
Gene ID: Rep_3552_c_1_1293
Type: TC
Location: 1457212 - 1458597 (+)
Type: TC
Location: 1457212 - 1458597 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-488
Species
CAG-488 sp000434915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.