Cluster: Rep_3552_CGC19
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_3552
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3552_c_1 | Rep_3552_c_1_769 | 876359 | 877705 | - | GH29 |
| pfam | Rep_3552_c_1 | Rep_3552_c_1_770 | 877823 | 878248 | - | CTP_transf_like |
| pfam | Rep_3552_c_1 | Rep_3552_c_1_771 | 878252 | 879115 | - | LicD |
| TC | Rep_3552_c_1 | Rep_3552_c_1_772 | 879281 | 880378 | + | 1.B.79.1.2 |
| TC | Rep_3552_c_1 | Rep_3552_c_1_773 | 880392 | 881504 | + | 1.B.79.1.2 |
Gene ID: Rep_3552_c_1_769
Type: CAZyme
Location: 876359 - 877705 (-)
Type: CAZyme
Location: 876359 - 877705 (-)
Gene ID: Rep_3552_c_1_770
Type: pfam
Location: 877823 - 878248 (-)
Type: pfam
Location: 877823 - 878248 (-)
Gene ID: Rep_3552_c_1_771
Type: pfam
Location: 878252 - 879115 (-)
Type: pfam
Location: 878252 - 879115 (-)
Gene ID: Rep_3552_c_1_772
Type: TC
Location: 879281 - 880378 (+)
Type: TC
Location: 879281 - 880378 (+)
Gene ID: Rep_3552_c_1_773
Type: TC
Location: 880392 - 881504 (+)
Type: TC
Location: 880392 - 881504 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-488
Species
CAG-488 sp000434915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.