Cluster: Rep_3552_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3552
- CGC Family ID: CGCFAM_05122
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3552_c_1 | Rep_3552_c_1_666 | 752466 | 753413 | + | GT2 |
| pfam | Rep_3552_c_1 | Rep_3552_c_1_667 | 753548 | 763828 | - | Flg_new | Flg_new | Flg_new | Flg_new | Flg_new | Flg_new | Flg_new |
| pfam | Rep_3552_c_1 | Rep_3552_c_1_668 | 764311 | 765084 | - | AP_endonuc_2 |
| CAZyme | Rep_3552_c_1 | Rep_3552_c_1_669 | 765087 | 766610 | - | GH63 |
| TC | Rep_3552_c_1 | Rep_3552_c_1_670 | 766642 | 768552 | - | 3.A.1.121.4 |
Gene ID: Rep_3552_c_1_666
Type: CAZyme
Location: 752466 - 753413 (+)
Type: CAZyme
Location: 752466 - 753413 (+)
Gene ID: Rep_3552_c_1_667
Type: pfam
Location: 753548 - 763828 (-)
Type: pfam
Location: 753548 - 763828 (-)
Gene ID: Rep_3552_c_1_668
Type: pfam
Location: 764311 - 765084 (-)
Type: pfam
Location: 764311 - 765084 (-)
Gene ID: Rep_3552_c_1_669
Type: CAZyme
Location: 765087 - 766610 (-)
Type: CAZyme
Location: 765087 - 766610 (-)
Gene ID: Rep_3552_c_1_670
Type: TC
Location: 766642 - 768552 (-)
Type: TC
Location: 766642 - 768552 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-488
Species
CAG-488 sp000434915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.