Cluster: Rep_3552_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_3552
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_3552_c_1 | Rep_3552_c_1_356 | 384373 | 386817 | - | GH3 |
| pfam | Rep_3552_c_1 | Rep_3552_c_1_357 | 386823 | 388142 | - | RmuC |
| TC | Rep_3552_c_1 | Rep_3552_c_1_358 | 388309 | 389937 | + | 3.A.1.5.2 |
| pfam | Rep_3552_c_1 | Rep_3552_c_1_359 | 389937 | 390389 | + | VanZ |
| CAZyme | Rep_3552_c_1 | Rep_3552_c_1_360 | 390441 | 392666 | - | GH31_15 |
Gene ID: Rep_3552_c_1_356
Type: CAZyme
Location: 384373 - 386817 (-)
Type: CAZyme
Location: 384373 - 386817 (-)
Gene ID: Rep_3552_c_1_357
Type: pfam
Location: 386823 - 388142 (-)
Type: pfam
Location: 386823 - 388142 (-)
Gene ID: Rep_3552_c_1_358
Type: TC
Location: 388309 - 389937 (+)
Type: TC
Location: 388309 - 389937 (+)
Gene ID: Rep_3552_c_1_359
Type: pfam
Location: 389937 - 390389 (+)
Type: pfam
Location: 389937 - 390389 (+)
Gene ID: Rep_3552_c_1_360
Type: CAZyme
Location: 390441 - 392666 (-)
Type: CAZyme
Location: 390441 - 392666 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
CAG-488
Species
CAG-488 sp000434915
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.